About JupyterHub
Jupyter is an open-source web application that allows you to create and share documents that contain live code, equations, visualizations and narrative text. Uses include: data cleaning and transformation, numerical simulation, statistical modeling, data visualization, machine learning, and much more. As such, Jupyterhub, an extension of Jupyter Notebook, is a valuable tool which
- enhances accessibility of high performance computational resources beyond the command line interface
- encourages collaboration across departments
- greatly improves the time from coding to results
Deployed is a JupyterHub environment utilizing Jupyterlab, not the classic Jupyter Notebook. For more on Jupyterlab, see here
Please note that all jobs submitted through this framework have a time limit of 8 hours.
Supported Kernels
- python 3.7.0
- R 3.5.1 (howto)
Using Jupyterhub to Access ARCC General Purpose Cluster
Note: More information on the general purpose cluster can be found here. You must have a RIT home directory, in order to use this resource. Please contact arcc *at* albany.edu if you need an account.
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Packages Installed
Current package and package versions installed in the base distributions are:
| Code Block | ||
|---|---|---|
| ||
# Name Version Build Channel
_r-mutex 1.0.0 mro_2 r
alembic 0.9.9 py_0 conda-forge
arpack 3.5.0 blas_openblas_202 [blas_openblas] conda-forge
asn1crypto 0.24.0 py36_3 conda-forge
async_generator 1.10 py_0 conda-forge
backcall 0.1.0 py_0 conda-forge
binutils_impl_linux-64 2.31.1 h6176602_1
binutils_linux-64 2.31.1 h6176602_3
blas 1.1 openblas conda-forge
bleach 2.1.4 py_1 conda-forge
bokeh 0.13.0 py36_0 conda-forge
bottleneck 1.2.1 py36h7eb728f_1 conda-forge
bzip2 1.0.6 h470a237_2 conda-forge
ca-certificates 2018.8.24 ha4d7672_0 conda-forge
cairo 1.14.12 h8948797_3
cartopy 0.16.0 py36h81b52dc_2 conda-forge
certifi 2018.8.24 py36_1001 conda-forge
cffi 1.11.5 py36h5e8e0c9_1 conda-forge
cftime 1.0.1 py36h7eb728f_0 conda-forge
chardet 3.0.4 py36_3 conda-forge
click 7.0 py_0 conda-forge
cloudpickle 0.5.6 py_0 conda-forge
configurable-http-proxy 1.3.0 0 conda-forge
cryptography 2.3.1 py36hdffb7b8_0 conda-forge
cryptography-vectors 2.3.1 py36_0 conda-forge
curl 7.61.0 h93b3f91_2 conda-forge
cycler 0.10.0 py_1 conda-forge
cytoolz 0.9.0.1 py36h470a237_0 conda-forge
dask 0.19.2 py_0 conda-forge
dask-core 0.19.2 py_0 conda-forge
dbus 1.13.2 h714fa37_1
decorator 4.3.0 py_0 conda-forge
distributed 1.23.2 py36_0 conda-forge
entrypoints 0.2.3 py36_2 conda-forge
expat 2.2.5 hfc679d8_2 conda-forge
fastcache 1.0.2 py36h470a237_1 conda-forge
fftw 3.3.8 h470a237_0 conda-forge
fontconfig 2.13.0 h9420a91_0
freetype 2.9.1 h6debe1e_4 conda-forge
fribidi 1.0.5 h7b6447c_0
gcc_impl_linux-64 7.3.0 habb00fd_1
gcc_linux-64 7.3.0 h553295d_3
geos 3.6.2 hfc679d8_3 conda-forge
gettext 0.19.8.1 h5e8e0c9_1 conda-forge
gfortran_impl_linux-64 7.3.0 hdf63c60_1
gfortran_linux-64 7.3.0 h553295d_3
glib 2.56.2 h464dc38_0 conda-forge
gmp 6.1.2 hfc679d8_0 conda-forge
gmpy2 2.0.8 py36h10f8cd9_2
graphite2 1.3.12 hfc679d8_1 conda-forge
gst-plugins-base 1.14.0 hbbd80ab_1
gstreamer 1.14.0 hb453b48_1
gxx_impl_linux-64 7.3.0 hdf63c60_1
gxx_linux-64 7.3.0 h553295d_3
h5netcdf 0.6.2 py_0 conda-forge
h5py 2.8.0 py36h7eb728f_2 conda-forge
harfbuzz 1.9.0 hee26f79_1 conda-forge
hdf4 4.2.13 h951d187_2 conda-forge
hdf5 1.10.2 hc401514_2 conda-forge
heapdict 1.0.0 py36_1000 conda-forge
html5lib 1.0.1 py_0 conda-forge
icu 58.2 hfc679d8_0 conda-forge
idna 2.7 py36_2 conda-forge
ipykernel 4.10.0 py36_0 conda-forge
ipyleaflet 0.9.0 py36_1 conda-forge
ipyleaflet 0.9.0 <pip>
ipython 6.5.0 py36_0 conda-forge
ipython_genutils 0.2.0 py_1 conda-forge
ipywidgets 7.4.2 py_0 conda-forge
jedi 0.12.1 py36_0 conda-forge
jinja2 2.10 py_1 conda-forge
jpeg 9c h470a237_1 conda-forge
jsonschema 2.6.0 py36_2 conda-forge
jupyter 1.0.0 py_1 conda-forge
jupyter_client 5.2.3 py_1 conda-forge
jupyter_console 5.2.0 py36_1 conda-forge
jupyter_contrib_core 0.3.3 py_2 conda-forge
jupyter_contrib_nbextensions 0.5.0 py36_0 conda-forge
jupyter_core 4.4.0 py_0 conda-forge
jupyter_highlight_selected_word 0.2.0 py36_0 conda-forge
jupyter_latex_envs 1.4.4 py36_0 conda-forge
jupyter_nbextensions_configurator 0.4.0 py36_0 conda-forge
jupyterhub 0.9.4 py36_0 conda-forge
jupyterhub-ldapauthenticator 1.2.2 py36_0 conda-forge
jupyterlab 0.34.12 py36_0 conda-forge
jupyterlab_launcher 0.13.1 py_2 conda-forge
kiwisolver 1.0.1 py36h2d50403_2 conda-forge
krb5 1.14.6 0 conda-forge
ldap3 2.5.1 py_0 conda-forge
libcurl 7.61.0 h1ad7b7a_0
libffi 3.2.1 hfc679d8_5 conda-forge
libgcc 7.2.0 h69d50b8_2 conda-forge
libgcc-ng 8.2.0 hdf63c60_1
libgfortran 3.0.0 1 conda-forge
libgfortran-ng 7.3.0 hdf63c60_0
libgit2 0.27.4 h5ee2e84_0 conda-forge
libiconv 1.15 h470a237_3 conda-forge
libnetcdf 4.6.1 he6cff42_8 conda-forge
libpng 1.6.35 ha92aebf_2 conda-forge
libsodium 1.0.16 h470a237_1 conda-forge
libssh2 1.8.0 h5b517e9_2 conda-forge
libstdcxx-ng 8.2.0 hdf63c60_1
libtiff 4.0.9 he6b73bb_2 conda-forge
libuuid 1.0.3 1 conda-forge
libxcb 1.13 h470a237_2 conda-forge
libxml2 2.9.8 h422b904_5 conda-forge
libxslt 1.1.32 h88dbc4e_2 conda-forge
locket 0.2.0 py_2 conda-forge
lxml 4.2.5 py36hc9114bc_0 conda-forge
make 4.2.1 h470a237_1002 conda-forge
mako 1.0.7 py_1 conda-forge
markupsafe 1.0 py36h470a237_1 conda-forge
matplotlib 3.0.0 py36h0b34cb6_1 conda-forge
metis 5.1.0 h470a237_3 conda-forge
mistune 0.8.3 py36h470a237_2 conda-forge
mpc 1.1.0 hb705a9b_6 conda-forge
mpfr 4.0.1 h16a7912_0 conda-forge
mpmath 1.0.0 py_0 conda-forge
mro-base 3.5.1 h1c2f66e_0 r
mro-basics 3.5.1 0 r
msgpack-python 0.5.6 py36h2d50403_2 conda-forge
nbconvert 5.3.1 py_1 conda-forge
nbformat 4.4.0 py_1 conda-forge
ncurses 6.1 hfc679d8_1 conda-forge
netcdf4 1.4.1 py36h62672b6_0 conda-forge
nodejs 10.8.0 hfc679d8_1 conda-forge
notebook 5.7.0 py36_0 conda-forge
numpy 1.15.2 py36_blas_openblashd3ea46f_0 [blas_openblas] conda-forge
olefile 0.46 py_0 conda-forge
openblas 0.2.20 8 conda-forge
openlibm 0.5.4 0 conda-forge
openspecfun 0.5.3 h26a2512_0 conda-forge
openssl 1.0.2p h470a237_0 conda-forge
owslib 0.17.0 py_0 conda-forge
packaging 18.0 py_0 conda-forge
pamela 0.3.0 py36_0 conda-forge
pandas 0.23.4 py36hf8a1672_0 conda-forge
pandoc 2.3 0 conda-forge
pandocfilters 1.4.2 py_1 conda-forge
pango 1.42.4 h049681c_0
parso 0.3.1 py_0 conda-forge
partd 0.3.8 py_1 conda-forge
pcre 8.42 h439df22_0
pcre2 10.23 2 conda-forge
pexpect 4.6.0 py36_0 conda-forge
pickleshare 0.7.5 py36_0 conda-forge
pillow 5.2.0 py36hc736899_1 conda-forge
pip 18.0 py36_1 conda-forge
pixman 0.34.0 h470a237_3 conda-forge
proj4 4.9.3 h470a237_8 conda-forge
prometheus_client 0.3.1 py_1 conda-forge
prompt_toolkit 1.0.15 py_1 conda-forge
psutil 5.4.7 py36h470a237_1 conda-forge
pthread-stubs 0.4 h470a237_1 conda-forge
ptyprocess 0.6.0 py36_1000 conda-forge
pyasn1 0.4.4 py_0 conda-forge
pycparser 2.19 py_0 conda-forge
pycurl 7.43.0.2 py36hb7f436b_0
pyepsg 0.3.2 py_1 conda-forge
pygments 2.2.0 py_1 conda-forge
pyopenssl 18.0.0 py36_0 conda-forge
pyparsing 2.2.1 py_0 conda-forge
pyproj 1.9.5.1 py36h508ed2a_5 conda-forge
pyqt 5.6.0 py36h8210e8a_7 conda-forge
pyshp 1.2.12 py_0 conda-forge
pysocks 1.6.8 py36_2 conda-forge
python 3.6.6 h5001a0f_0 conda-forge
python-dateutil 2.7.3 py_0 conda-forge
python-editor 1.0.3 py_0 conda-forge
python-oauth2 1.0.1 py36_0 conda-forge
pytz 2018.5 py_0 conda-forge
pyyaml 3.13 py36h470a237_1 conda-forge
pyzmq 17.1.2 py36hae99301_0 conda-forge
qt 5.6.3 h39df351_1
qtconsole 4.4.1 py36_1 conda-forge
r 3.5.1 mro351_0 r
r-assertthat 0.2.0 mro351hf348343_0 r
r-bh 1.66.0_1 mro351hf348343_0 r
r-bindr 0.1.1 mro351hf348343_0 r
r-bindrcpp 0.2.2 mro351hebc1506_0 r
r-bit 1.1_14 mro351hd10c6a6_0 r
r-bit64 0.9_7 mro351hd10c6a6_0 r
r-blob 1.1.1 mro351hf348343_0 r
r-boot 1.3_20 mro351_0 r
r-checkpoint 0.4.4 mro351_0 r
r-class 7.3_14 mro351hd10c6a6_0 r
r-cli 1.0.0 mro351hf348343_0 r
r-cluster 2.0.7_1 mro351hac1494b_0 r
r-codetools 0.2_15 mro351hf348343_0 r
r-crayon 1.3.4 mro351hf348343_0 r
r-curl 3.2 mro351hd10c6a6_0 r
r-dbi 1.0.0 mro351hf348343_0 r
r-dbplyr 1.2.2 mro351hf348343_0 r
r-deployrrserve 9.0.0 mro351_0 r
r-digest 0.6.15 mro351hd10c6a6_0 r
r-doparallel 1.0.13 mro351_0 r
r-dplyr 0.7.6 mro351hebc1506_0 r
r-fansi 0.2.3 mro351hd10c6a6_0 r
r-foreach 1.5.0 mro351_0 r
r-foreign 0.8_70 mro351_0 r
r-glue 1.3.0 mro351hd10c6a6_0 r
r-iterators 1.0.10 mro351hf348343_0 r
r-jsonlite 1.5 mro351hd10c6a6_0 r
r-kernsmooth 2.23_15 mro351hac1494b_0 r
r-lattice 0.20_35 mro351hd10c6a6_0 r
r-magrittr 1.5 mro351hf348343_0 r
r-mass 7.3_49 mro351_0 r
r-matrix 1.2_14 mro351hac1494b_0 r
r-memoise 1.1.0 mro351hf348343_0 r
r-mgcv 1.8_23 mro351_0 r
r-microsoftr 3.5.0.108 mro351_0 r
r-nlme 3.1_137 mro351hac1494b_0 r
r-nnet 7.3_12 mro351hd10c6a6_0 r
r-pillar 1.3.0 mro351hf348343_0 r
r-pkgconfig 2.0.1 mro351hf348343_0 r
r-plogr 0.2.0 mro351hf348343_0 r
r-png 0.1_7 mro351hd10c6a6_0 r
r-prettyunits 1.0.2 mro351hf348343_0 r
r-purrr 0.2.5 mro351hd10c6a6_0 r
r-r6 2.2.2 mro351hf348343_0 r
r-rcpp 0.12.18 mro351hebc1506_0 r
r-recommended 3.5.1 mro351_0 r
r-revoioq 10.0.0 mro351_0 r
r-revomods 11.0.0 mro351_0 r
r-revoutilsmath 11.0.0 mro351_0 r
r-rlang 0.2.1 mro351hd10c6a6_0 r
r-rpart 4.1_13 mro351hd10c6a6_0 r
r-rsqlite 2.1.1 mro351hebc1506_0 r
r-runit 0.4.26 mro351_0 r
r-spatial 7.3_11 mro351_0 r
r-survival 2.41_3 mro351_0 r
r-tibble 1.4.2 mro351hd10c6a6_0 r
r-tidyselect 0.2.4 mro351hebc1506_0 r
r-utf8 1.1.4 mro351hd10c6a6_0 r
readline 7.0 haf1bffa_1 conda-forge
requests 2.19.1 py36_1 conda-forge
rise 5.4.1 py36_0 conda-forge
rpy2 2.9.4 py36mro351h6853232_0 r
scikit-learn 0.20.0 py36_blas_openblasha84fab4_201 [blas_openblas] conda-forge
scipy 1.1.0 py36_blas_openblash7943236_201 [blas_openblas] conda-forge
send2trash 1.5.0 py_0 conda-forge
setuptools 40.4.0 py36_1000 conda-forge
shapely 1.6.4 py36h164cb2d_1 conda-forge
simplegeneric 0.8.1 py_1 conda-forge
sip 4.18.1 py36hfc679d8_0 conda-forge
six 1.11.0 py36_1 conda-forge
sortedcontainers 2.0.5 py_0 conda-forge
sqlalchemy 1.2.12 py36h470a237_0 conda-forge
sqlite 3.25.2 hb1c47c0_0 conda-forge
suitesparse 4.5.6 blas_openblash55dcaef_201 [blas_openblas] conda-forge
sympy 1.3 py36_0 conda-forge
system 5.8 2 anaconda
tbb 2019.0 h2d50403_0 conda-forge
tblib 1.3.2 py_1 conda-forge
terminado 0.8.1 py36_1 conda-forge
testpath 0.3.1 py36_1 conda-forge
tk 8.6.8 ha92aebf_0 conda-forge
toolz 0.9.0 py_0 conda-forge
tornado 5.1.1 py36h470a237_0 conda-forge
traitlets 4.3.2 py36_0 conda-forge
traittypes 0.2.1 <pip>
traittypes 0.2.1 py_1 conda-forge
urllib3 1.23 py36_1 conda-forge
wcwidth 0.1.7 py_1 conda-forge
webencodings 0.5.1 py_1 conda-forge
wheel 0.31.1 py36_1001 conda-forge
widgetsnbextension 3.4.2 py36_0 conda-forge
xarray 0.10.9 py36_0 conda-forge
xorg-libxau 1.0.8 h470a237_6 conda-forge
xorg-libxdmcp 1.1.2 h470a237_7 conda-forge
xz 5.2.4 h470a237_1 conda-forge
yaml 0.1.7 h470a237_1 conda-forge
zeromq 4.2.5 hfc679d8_6 conda-forge
zict 0.1.3 py_0 conda-forge
zlib 1.2.11 h470a237_3 conda-forge |
# Name Version Build Channel_r-mutex 1.0.0 mro_2 ralembic 0.9.9 py_0 conda-forgearpack 3.5.0 blas_openblas_202 [blas_openblas] conda-forgeasn1crypto 0.24.0 py36_3 conda-forgeasync_generator 1.10 py_0 conda-forgebackcall 0.1.0 py_0 conda-forgebinutils_impl_linux-64 2.31.1 h6176602_1binutils_linux-64 2.31.1 h6176602_3blas 1.1 openblas conda-forgebleach 2.1.4 py_1 conda-forgebokeh 0.13.0 py36_0 conda-forgebottleneck 1.2.1 py36h7eb728f_1 conda-forgebzip2 1.0.6 h470a237_2 conda-forgeca-certificates 2018.8.24 ha4d7672_0 conda-forgecairo 1.14.12 h8948797_3cartopy 0.16.0 py36h81b52dc_2 conda-forgecertifi 2018.8.24 py36_1001 conda-forgecffi 1.11.5 py36h5e8e0c9_1 conda-forgecftime 1.0.1 py36h7eb728f_0 conda-forgechardet 3.0.4 py36_3 conda-forgeclick 7.0 py_0 conda-forgecloudpickle 0.5.6 py_0 conda-forgeconfigurable-http-proxy 1.3.0 0 conda-forgecryptography 2.3.1 py36hdffb7b8_0 conda-forgecryptography-vectors 2.3.1 py36_0 conda-forgecurl 7.61.0 h93b3f91_2 conda-forgecycler 0.10.0 py_1 conda-forgecytoolz 0.9.0.1 py36h470a237_0 conda-forgedask 0.19.2 py_0 conda-forgedask-core 0.19.2 py_0 conda-forgedbus 1.13.2 h714fa37_1decorator 4.3.0 py_0 conda-forgedistributed 1.23.2 py36_0 conda-forgeentrypoints 0.2.3 py36_2 conda-forgeexpat 2.2.5 hfc679d8_2 conda-forgefastcache 1.0.2 py36h470a237_1 conda-forgefftw 3.3.8 h470a237_0 conda-forgefontconfig 2.13.0 h9420a91_0freetype 2.9.1 h6debe1e_4 conda-forgefribidi 1.0.5 h7b6447c_0gcc_impl_linux-64 7.3.0 habb00fd_1gcc_linux-64 7.3.0 h553295d_3geos 3.6.2 hfc679d8_3 conda-forgegettext 0.19.8.1 h5e8e0c9_1 conda-forgegfortran_impl_linux-64 7.3.0 hdf63c60_1gfortran_linux-64 7.3.0 h553295d_3glib 2.56.2 h464dc38_0 conda-forgegmp 6.1.2 hfc679d8_0 conda-forgegmpy2 2.0.8 py36h10f8cd9_2graphite2 1.3.12 hfc679d8_1 conda-forgegst-plugins-base 1.14.0 hbbd80ab_1gstreamer 1.14.0 hb453b48_1gxx_impl_linux-64 7.3.0 hdf63c60_1gxx_linux-64 7.3.0 h553295d_3h5netcdf 0.6.2 py_0 conda-forgeh5py 2.8.0 py36h7eb728f_2 conda-forgeharfbuzz 1.9.0 hee26f79_1 conda-forgehdf4 4.2.13 h951d187_2 conda-forgehdf5 1.10.2 hc401514_2 conda-forgeheapdict 1.0.0 py36_1000 conda-forgehtml5lib 1.0.1 py_0 conda-forgeicu 58.2 hfc679d8_0 conda-forgeidna 2.7 py36_2 conda-forgeipykernel 4.10.0 py36_0 conda-forgeipyleaflet 0.9.0 py36_1 conda-forgeipyleaflet 0.9.0 <pip>ipython 6.5.0 py36_0 conda-forgeipython_genutils 0.2.0 py_1 conda-forgeipywidgets 7.4.2 py_0 conda-forgejedi 0.12.1 py36_0 conda-forgejinja2 2.10 py_1 conda-forgejpeg 9c h470a237_1 conda-forgejsonschema 2.6.0 py36_2 conda-forgejupyter 1.0.0 py_1 conda-forgejupyter_client 5.2.3 py_1 conda-forgejupyter_console 5.2.0 py36_1 conda-forgejupyter_contrib_core 0.3.3 py_2 conda-forgejupyter_contrib_nbextensions 0.5.0 py36_0 conda-forgejupyter_core 4.4.0 py_0 conda-forgejupyter_highlight_selected_word 0.2.0 py36_0 conda-forgejupyter_latex_envs 1.4.4 py36_0 conda-forgejupyter_nbextensions_configurator 0.4.0 py36_0 conda-forgejupyterhub 0.9.4 py36_0 conda-forgejupyterhub-ldapauthenticator 1.2.2 py36_0 conda-forgejupyterlab 0.34.12 py36_0 conda-forgejupyterlab_launcher 0.13.1 py_2 conda-forgekiwisolver 1.0.1 py36h2d50403_2 conda-forgekrb5 1.14.6 0 conda-forgeldap3 2.5.1 py_0 conda-forgelibcurl 7.61.0 h1ad7b7a_0libffi 3.2.1 hfc679d8_5 conda-forgelibgcc 7.2.0 h69d50b8_2 conda-forgelibgcc-ng 8.2.0 hdf63c60_1libgfortran 3.0.0 1 conda-forgelibgfortran-ng 7.3.0 hdf63c60_0libgit2 0.27.4 h5ee2e84_0 conda-forgelibiconv 1.15 h470a237_3 conda-forgelibnetcdf 4.6.1 he6cff42_8 conda-forgelibpng 1.6.35 ha92aebf_2 conda-forgelibsodium 1.0.16 h470a237_1 conda-forgelibssh2 1.8.0 h5b517e9_2 conda-forgelibstdcxx-ng 8.2.0 hdf63c60_1libtiff 4.0.9 he6b73bb_2 conda-forgelibuuid 1.0.3 1 conda-forgelibxcb 1.13 h470a237_2 conda-forgelibxml2 2.9.8 h422b904_5 conda-forgelibxslt 1.1.32 h88dbc4e_2 conda-forgelocket 0.2.0 py_2 conda-forgelxml 4.2.5 py36hc9114bc_0 conda-forgemake 4.2.1 h470a237_1002 conda-forgemako 1.0.7 py_1 conda-forgemarkupsafe 1.0 py36h470a237_1 conda-forgematplotlib 3.0.0 py36h0b34cb6_1 conda-forgemetis 5.1.0 h470a237_3 conda-forgemistune 0.8.3 py36h470a237_2 conda-forgempc 1.1.0 hb705a9b_6 conda-forgempfr 4.0.1 h16a7912_0 conda-forgempmath 1.0.0 py_0 conda-forgemro-base 3.5.1 h1c2f66e_0 rmro-basics 3.5.1 0 rmsgpack-python 0.5.6 py36h2d50403_2 conda-forgenbconvert 5.3.1 py_1 conda-forgenbformat 4.4.0 py_1 conda-forgencurses 6.1 hfc679d8_1 conda-forgenetcdf4 1.4.1 py36h62672b6_0 conda-forgenodejs 10.8.0 hfc679d8_1 conda-forgenotebook 5.7.0 py36_0 conda-forgenumpy 1.15.2 py36_blas_openblashd3ea46f_0 [blas_openblas] conda-forgeolefile 0.46 py_0 conda-forgeopenblas 0.2.20 8 conda-forgeopenlibm 0.5.4 0 conda-forgeopenspecfun 0.5.3 h26a2512_0 conda-forgeopenssl 1.0.2p h470a237_0 conda-forgeowslib 0.17.0 py_0 conda-forgepackaging 18.0 py_0 conda-forgepamela 0.3.0 py36_0 conda-forgepandas 0.23.4 py36hf8a1672_0 conda-forgepandoc 2.3 0 conda-forgepandocfilters 1.4.2 py_1 conda-forgepango 1.42.4 h049681c_0parso 0.3.1 py_0 conda-forgepartd 0.3.8 py_1 conda-forgepcre 8.42 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